Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.08■□□□□ 0.32
THBS1P07996 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.08■□□□□ 0.32
THBS1P07996 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.08■□□□□ 0.32
THBS1P07996 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
THBS1P07996 AC012306.2-201ENST00000609350 630 ntBASIC17.08■□□□□ 0.32
THBS1P07996 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.08■□□□□ 0.32
THBS1P07996 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
THBS1P07996 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.08■□□□□ 0.32
THBS1P07996 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
THBS1P07996 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.08■□□□□ 0.32
THBS1P07996 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
THBS1P07996 AC007613.1-201ENST00000572811 2597 ntBASIC17.07■□□□□ 0.32
THBS1P07996 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.07■□□□□ 0.32
THBS1P07996 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.07■□□□□ 0.32
THBS1P07996 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 TSPY17P-201ENST00000450329 467 ntBASIC17.07■□□□□ 0.32
THBS1P07996 RBM17P1-201ENST00000453646 1190 ntBASIC17.07■□□□□ 0.32
THBS1P07996 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.07■□□□□ 0.32
THBS1P07996 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.07■□□□□ 0.32
THBS1P07996 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.07■□□□□ 0.32
THBS1P07996 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.07■□□□□ 0.32
THBS1P07996 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.07■□□□□ 0.32
THBS1P07996 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.07■□□□□ 0.32
THBS1P07996 AL023803.3-201ENST00000615559 522 ntBASIC17.07■□□□□ 0.32
THBS1P07996 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.07■□□□□ 0.32
THBS1P07996 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.07■□□□□ 0.32
THBS1P07996 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
THBS1P07996 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.07■□□□□ 0.32
THBS1P07996 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.07■□□□□ 0.32
THBS1P07996 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
THBS1P07996 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
THBS1P07996 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.06■□□□□ 0.32
THBS1P07996 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
THBS1P07996 KRT8P50-201ENST00000562022 1438 ntBASIC17.06■□□□□ 0.32
THBS1P07996 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
THBS1P07996 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.06■□□□□ 0.32
THBS1P07996 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.06■□□□□ 0.32
THBS1P07996 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
THBS1P07996 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.06■□□□□ 0.32
THBS1P07996 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.06■□□□□ 0.32
THBS1P07996 MIR4674-201ENST00000582457 87 ntBASIC17.06■□□□□ 0.32
THBS1P07996 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.06■□□□□ 0.32
THBS1P07996 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
THBS1P07996 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.06■□□□□ 0.32
THBS1P07996 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.06■□□□□ 0.32
THBS1P07996 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THBS1P07996 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
THBS1P07996 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
THBS1P07996 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms