Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.36■■□□□ 1.49
COL5A2P05997 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL5A2P05997 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL5A2P05997 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC24.36■■□□□ 1.49
COL5A2P05997 GPX1P2-201ENST00000429271 606 ntBASIC24.36■■□□□ 1.49
COL5A2P05997 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.36■■□□□ 1.49
COL5A2P05997 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.36■■□□□ 1.49
COL5A2P05997 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.36■■□□□ 1.49
COL5A2P05997 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL5A2P05997 UROS-202ENST00000368778 1556 ntTSL 2 BASIC24.36■■□□□ 1.49
COL5A2P05997 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL5A2P05997 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.36■■□□□ 1.49
COL5A2P05997 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.36■■□□□ 1.49
COL5A2P05997 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.35■■□□□ 1.49
COL5A2P05997 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.35■■□□□ 1.49
COL5A2P05997 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 GGCT-205ENST00000409436 954 ntTSL 3 BASIC24.35■■□□□ 1.49
COL5A2P05997 RPS2P1-201ENST00000434010 821 ntBASIC24.35■■□□□ 1.49
COL5A2P05997 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.35■■□□□ 1.49
COL5A2P05997 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC24.35■■□□□ 1.49
COL5A2P05997 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC24.35■■□□□ 1.49
COL5A2P05997 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.35■■□□□ 1.49
COL5A2P05997 AC027601.4-201ENST00000611259 610 ntBASIC24.35■■□□□ 1.49
COL5A2P05997 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.35■■□□□ 1.49
COL5A2P05997 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.35■■□□□ 1.49
COL5A2P05997 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL5A2P05997 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.35■■□□□ 1.49
COL5A2P05997 AL157384.1-201ENST00000445995 2473 ntBASIC24.34■■□□□ 1.49
COL5A2P05997 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL5A2P05997 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL5A2P05997 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL5A2P05997 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
COL5A2P05997 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
COL5A2P05997 MIR149-201ENST00000384879 89 ntBASIC24.34■■□□□ 1.49
COL5A2P05997 UPF3AP3-201ENST00000420996 769 ntBASIC24.34■■□□□ 1.49
COL5A2P05997 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC24.34■■□□□ 1.49
COL5A2P05997 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC24.34■■□□□ 1.49
COL5A2P05997 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL5A2P05997 AC011467.2-201ENST00000598425 242 ntBASIC24.34■■□□□ 1.49
COL5A2P05997 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL5A2P05997 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.34■■□□□ 1.49
COL5A2P05997 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
COL5A2P05997 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL5A2P05997 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC24.34■■□□□ 1.49
COL5A2P05997 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
COL5A2P05997 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.33■■□□□ 1.49
COL5A2P05997 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC24.33■■□□□ 1.49
COL5A2P05997 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC24.33■■□□□ 1.49
COL5A2P05997 RPSAP43-201ENST00000402237 625 ntBASIC24.33■■□□□ 1.49
COL5A2P05997 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
COL5A2P05997 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC24.33■■□□□ 1.49
COL5A2P05997 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.33■■□□□ 1.49
COL5A2P05997 AC025062.2-201ENST00000605477 670 ntBASIC24.33■■□□□ 1.49
COL5A2P05997 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 CAND2-206ENST00000626378 333 ntTSL 5 BASIC24.33■■□□□ 1.49
COL5A2P05997 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL5A2P05997 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
COL5A2P05997 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
COL5A2P05997 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
COL5A2P05997 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC24.32■■□□□ 1.48
COL5A2P05997 PMS2P2-201ENST00000425039 1128 ntBASIC24.32■■□□□ 1.48
COL5A2P05997 AL591424.1-201ENST00000442569 1213 ntBASIC24.32■■□□□ 1.48
COL5A2P05997 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.32■■□□□ 1.48
COL5A2P05997 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.32■■□□□ 1.48
COL5A2P05997 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.32■■□□□ 1.48
COL5A2P05997 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 Z83851.2-201ENST00000609564 659 ntBASIC24.32■■□□□ 1.48
COL5A2P05997 AP005117.1-201ENST00000584346 1413 ntBASIC24.32■■□□□ 1.48
COL5A2P05997 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.32■■□□□ 1.48
COL5A2P05997 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
COL5A2P05997 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
COL5A2P05997 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
COL5A2P05997 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC24.32■■□□□ 1.48
COL5A2P05997 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC24.32■■□□□ 1.48
COL5A2P05997 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.32■■□□□ 1.48
COL5A2P05997 AC068472.1-201ENST00000474589 881 ntBASIC24.32■■□□□ 1.48
COL5A2P05997 AC009533.2-201ENST00000543664 586 ntBASIC24.32■■□□□ 1.48
COL5A2P05997 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms