Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSPG5O95196 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.89■□□□□ 0.77
CSPG5O95196 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CSPG5O95196 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
CSPG5O95196 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CSPG5O95196 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSPG5O95196 AC099343.3-201ENST00000605834 2503 ntBASIC19.89■□□□□ 0.77
CSPG5O95196 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CSPG5O95196 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.88■□□□□ 0.77
CSPG5O95196 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.88■□□□□ 0.77
CSPG5O95196 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.88■□□□□ 0.77
CSPG5O95196 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.88■□□□□ 0.77
CSPG5O95196 AL353801.3-201ENST00000609898 542 ntBASIC19.88■□□□□ 0.77
CSPG5O95196 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.88■□□□□ 0.77
CSPG5O95196 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.88■□□□□ 0.77
CSPG5O95196 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CSPG5O95196 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSPG5O95196 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.88■□□□□ 0.77
CSPG5O95196 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.87■□□□□ 0.77
CSPG5O95196 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 HCG11-201ENST00000411553 5696 ntBASIC19.87■□□□□ 0.77
CSPG5O95196 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSPG5O95196 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSPG5O95196 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CSPG5O95196 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.87■□□□□ 0.77
CSPG5O95196 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.87■□□□□ 0.77
CSPG5O95196 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.87■□□□□ 0.77
CSPG5O95196 AL121912.1-201ENST00000603683 238 ntBASIC19.87■□□□□ 0.77
CSPG5O95196 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CSPG5O95196 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.87■□□□□ 0.77
CSPG5O95196 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSPG5O95196 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.87■□□□□ 0.77
CSPG5O95196 AC087289.5-201ENST00000586076 3175 ntBASIC19.87■□□□□ 0.77
CSPG5O95196 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.87■□□□□ 0.77
CSPG5O95196 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CSPG5O95196 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CSPG5O95196 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 KRT8P3-201ENST00000519669 1449 ntBASIC19.86■□□□□ 0.77
CSPG5O95196 AC233702.3-201ENST00000578656 1387 ntBASIC19.86■□□□□ 0.77
CSPG5O95196 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CSPG5O95196 AL590627.1-203ENST00000421194 1026 ntBASIC19.86■□□□□ 0.77
CSPG5O95196 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CSPG5O95196 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CSPG5O95196 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.86■□□□□ 0.77
CSPG5O95196 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.86■□□□□ 0.77
CSPG5O95196 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.86■□□□□ 0.77
CSPG5O95196 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.86■□□□□ 0.77
CSPG5O95196 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.86■□□□□ 0.77
CSPG5O95196 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.86■□□□□ 0.77
CSPG5O95196 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSPG5O95196 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CSPG5O95196 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSPG5O95196 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.85■□□□□ 0.77
CSPG5O95196 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.85■□□□□ 0.77
CSPG5O95196 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSPG5O95196 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSPG5O95196 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CSPG5O95196 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSPG5O95196 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSPG5O95196 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.85■□□□□ 0.77
CSPG5O95196 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.85■□□□□ 0.77
CSPG5O95196 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSPG5O95196 AKR1C7P-201ENST00000305623 895 ntBASIC19.85■□□□□ 0.77
CSPG5O95196 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSPG5O95196 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms