Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A3O75365 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A3O75365 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A3O75365 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.72■□□□□ 0.27
PTP4A3O75365 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A3O75365 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.71■□□□□ 0.27
PTP4A3O75365 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTP4A3O75365 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.71■□□□□ 0.27
PTP4A3O75365 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.71■□□□□ 0.27
PTP4A3O75365 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.71■□□□□ 0.27
PTP4A3O75365 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.71■□□□□ 0.27
PTP4A3O75365 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 DGCR10-201ENST00000609839 495 ntBASIC16.71■□□□□ 0.27
PTP4A3O75365 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PTP4A3O75365 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PTP4A3O75365 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PTP4A3O75365 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A3O75365 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.71■□□□□ 0.26
PTP4A3O75365 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTP4A3O75365 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.7■□□□□ 0.26
PTP4A3O75365 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PTP4A3O75365 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PTP4A3O75365 AC138028.4-201ENST00000564984 1845 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.7■□□□□ 0.26
PTP4A3O75365 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.7■□□□□ 0.26
PTP4A3O75365 SLC25A6P5-201ENST00000435663 894 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 MFAP1P1-201ENST00000442257 1255 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 MCCD1P1-208ENST00000445732 328 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 NUDT16P1-203ENST00000513809 620 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 SLC25A1P4-201ENST00000567977 778 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PTP4A3O75365 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.7■□□□□ 0.26
PTP4A3O75365 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 AC034236.2-201ENST00000606662 1610 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 AC011270.2-201ENST00000624293 2550 ntBASIC16.7■□□□□ 0.26
PTP4A3O75365 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTP4A3O75365 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A3O75365 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PTP4A3O75365 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTP4A3O75365 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PTP4A3O75365 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.69■□□□□ 0.26
PTP4A3O75365 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTP4A3O75365 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTP4A3O75365 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTP4A3O75365 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTP4A3O75365 AIRN-201ENST00000601203 4374 ntBASIC16.69■□□□□ 0.26
PTP4A3O75365 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTP4A3O75365 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.69■□□□□ 0.26
PTP4A3O75365 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTP4A3O75365 KRT18P29-201ENST00000397031 1267 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms