Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH16O75309 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH16O75309 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH16O75309 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH16O75309 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH16O75309 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDH16O75309 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH16O75309 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.76■□□□□ 0.59
CDH16O75309 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.76■□□□□ 0.59
CDH16O75309 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH16O75309 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH16O75309 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH16O75309 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CDH16O75309 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH16O75309 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH16O75309 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDH16O75309 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH16O75309 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH16O75309 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH16O75309 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH16O75309 PRKY-204ENST00000533551 1019 ntBASIC18.75■□□□□ 0.59
CDH16O75309 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH16O75309 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.75■□□□□ 0.59
CDH16O75309 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH16O75309 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 AC012317.2-201ENST00000623305 2251 ntBASIC18.75■□□□□ 0.59
CDH16O75309 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH16O75309 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 AC069152.1-201ENST00000438030 544 ntBASIC18.74■□□□□ 0.59
CDH16O75309 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
CDH16O75309 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 AC012313.1-201ENST00000593393 3059 ntBASIC18.74■□□□□ 0.59
CDH16O75309 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH16O75309 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH16O75309 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH16O75309 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH16O75309 MYLKP1-201ENST00000509077 1580 ntBASIC18.73■□□□□ 0.59
CDH16O75309 NBPF21P-201ENST00000425093 1451 ntBASIC18.73■□□□□ 0.59
CDH16O75309 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH16O75309 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
CDH16O75309 Z85996.1-201ENST00000494644 937 ntBASIC18.73■□□□□ 0.59
CDH16O75309 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH16O75309 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH16O75309 AC004264.1-201ENST00000608354 794 ntBASIC18.73■□□□□ 0.59
CDH16O75309 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH16O75309 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH16O75309 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDH16O75309 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH16O75309 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH16O75309 KRT8P11-201ENST00000409686 1436 ntBASIC18.73■□□□□ 0.59
CDH16O75309 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH16O75309 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH16O75309 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms