Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 AC117947.1-201ENST00000427448 529 ntBASIC17.98■□□□□ 0.47
CNOT3O75175 TSPY17P-201ENST00000450329 467 ntBASIC17.98■□□□□ 0.47
CNOT3O75175 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.98■□□□□ 0.47
CNOT3O75175 NTF6B-201ENST00000591913 560 ntBASIC17.98■□□□□ 0.47
CNOT3O75175 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CNOT3O75175 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CNOT3O75175 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CNOT3O75175 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.98■□□□□ 0.47
CNOT3O75175 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CNOT3O75175 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.98■□□□□ 0.47
CNOT3O75175 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CNOT3O75175 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CNOT3O75175 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.98■□□□□ 0.47
CNOT3O75175 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.97■□□□□ 0.47
CNOT3O75175 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CNOT3O75175 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.97■□□□□ 0.47
CNOT3O75175 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CNOT3O75175 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.97■□□□□ 0.47
CNOT3O75175 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.97■□□□□ 0.47
CNOT3O75175 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.97■□□□□ 0.47
CNOT3O75175 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.97■□□□□ 0.47
CNOT3O75175 PRSS44-201ENST00000515154 1146 ntBASIC17.97■□□□□ 0.47
CNOT3O75175 AP003041.3-201ENST00000527151 707 ntBASIC17.97■□□□□ 0.47
CNOT3O75175 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
CNOT3O75175 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.97■□□□□ 0.47
CNOT3O75175 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 AL138781.2-201ENST00000617896 1843 ntBASIC17.97■□□□□ 0.47
CNOT3O75175 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CNOT3O75175 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CNOT3O75175 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CNOT3O75175 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.96■□□□□ 0.47
CNOT3O75175 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.96■□□□□ 0.47
CNOT3O75175 BX664615.1-201ENST00000443558 458 ntBASIC17.96■□□□□ 0.47
CNOT3O75175 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.96■□□□□ 0.47
CNOT3O75175 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.96■□□□□ 0.47
CNOT3O75175 AC139887.4-201ENST00000607877 719 ntBASIC17.96■□□□□ 0.47
CNOT3O75175 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.96■□□□□ 0.47
CNOT3O75175 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.96■□□□□ 0.47
CNOT3O75175 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNOT3O75175 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.96■□□□□ 0.47
CNOT3O75175 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
CNOT3O75175 AC106820.2-201ENST00000563775 3264 ntBASIC17.96■□□□□ 0.46
CNOT3O75175 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT3O75175 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNOT3O75175 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CNOT3O75175 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT3O75175 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.95■□□□□ 0.46
CNOT3O75175 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.95■□□□□ 0.46
CNOT3O75175 TSPY23P-201ENST00000440136 739 ntBASIC17.95■□□□□ 0.46
CNOT3O75175 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.95■□□□□ 0.46
CNOT3O75175 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CNOT3O75175 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CNOT3O75175 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.95■□□□□ 0.46
CNOT3O75175 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CNOT3O75175 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNOT3O75175 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms