Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 KRT18P38-201ENST00000449496 1282 ntBASIC18.8■□□□□ 0.6
PRAMEF11O60813 AC092647.4-201ENST00000457211 535 ntBASIC18.8■□□□□ 0.6
PRAMEF11O60813 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 AL049597.2-201ENST00000565575 961 ntBASIC18.8■□□□□ 0.6
PRAMEF11O60813 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 AC005082.1-201ENST00000413042 2259 ntBASIC18.8■□□□□ 0.6
PRAMEF11O60813 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRAMEF11O60813 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.8■□□□□ 0.6
PRAMEF11O60813 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 AC009102.3-201ENST00000623118 1491 ntBASIC18.79■□□□□ 0.6
PRAMEF11O60813 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 AL359075.1-203ENST00000462729 1002 ntBASIC18.79■□□□□ 0.6
PRAMEF11O60813 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEF11O60813 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.79■□□□□ 0.6
PRAMEF11O60813 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEF11O60813 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 SDHAP2-201ENST00000455183 2001 ntBASIC18.78■□□□□ 0.6
PRAMEF11O60813 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEF11O60813 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF11O60813 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF11O60813 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF11O60813 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF11O60813 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF11O60813 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 LINC01238-205ENST00000567549 1107 ntBASIC18.77■□□□□ 0.6
PRAMEF11O60813 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRAMEF11O60813 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEF11O60813 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms