Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NOBOXO60393 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NOBOXO60393 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
NOBOXO60393 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.36■□□□□ 0.53
NOBOXO60393 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.36■□□□□ 0.53
NOBOXO60393 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.36■□□□□ 0.53
NOBOXO60393 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NOBOXO60393 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
NOBOXO60393 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.36■□□□□ 0.53
NOBOXO60393 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.36■□□□□ 0.53
NOBOXO60393 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.36■□□□□ 0.53
NOBOXO60393 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.36■□□□□ 0.53
NOBOXO60393 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
NOBOXO60393 AC005332.1-201ENST00000577698 1310 ntBASIC18.36■□□□□ 0.53
NOBOXO60393 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
NOBOXO60393 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NOBOXO60393 AC083849.1-201ENST00000615227 514 ntBASIC18.36■□□□□ 0.53
NOBOXO60393 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.36■□□□□ 0.53
NOBOXO60393 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NOBOXO60393 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOBOXO60393 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
NOBOXO60393 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 TEX21P-204ENST00000641479 1693 ntBASIC18.35■□□□□ 0.53
NOBOXO60393 AC036111.1-201ENST00000533973 1582 ntBASIC18.35■□□□□ 0.53
NOBOXO60393 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
NOBOXO60393 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
NOBOXO60393 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NOBOXO60393 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
NOBOXO60393 IER3-202ENST00000376377 1350 ntBASIC18.35■□□□□ 0.53
NOBOXO60393 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NOBOXO60393 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.35■□□□□ 0.53
NOBOXO60393 AC116407.4-201ENST00000623319 1061 ntBASIC18.35■□□□□ 0.53
NOBOXO60393 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NOBOXO60393 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.35■□□□□ 0.53
NOBOXO60393 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.35■□□□□ 0.53
NOBOXO60393 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NOBOXO60393 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOBOXO60393 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.34■□□□□ 0.53
NOBOXO60393 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NOBOXO60393 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NOBOXO60393 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
NOBOXO60393 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.34■□□□□ 0.53
NOBOXO60393 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.34■□□□□ 0.53
NOBOXO60393 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.34■□□□□ 0.53
NOBOXO60393 AL136038.3-201ENST00000561909 1096 ntBASIC18.34■□□□□ 0.53
NOBOXO60393 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.34■□□□□ 0.53
NOBOXO60393 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.34■□□□□ 0.53
NOBOXO60393 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.34■□□□□ 0.53
NOBOXO60393 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NOBOXO60393 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOBOXO60393 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.33■□□□□ 0.53
NOBOXO60393 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
NOBOXO60393 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
NOBOXO60393 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOBOXO60393 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOBOXO60393 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOBOXO60393 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NOBOXO60393 MCCD1P1-208ENST00000445732 328 ntBASIC18.33■□□□□ 0.52
NOBOXO60393 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms