Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP2AO43633 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP2AO43633 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 AC018445.3-201ENST00000624177 1945 ntBASIC20.86■□□□□ 0.93
CHMP2AO43633 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CHMP2AO43633 AC092597.1-201ENST00000487352 616 ntBASIC20.86■□□□□ 0.93
CHMP2AO43633 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.86■□□□□ 0.93
CHMP2AO43633 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP2AO43633 AC104390.1-201ENST00000555663 520 ntBASIC20.86■□□□□ 0.93
CHMP2AO43633 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CHMP2AO43633 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.86■□□□□ 0.93
CHMP2AO43633 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CHMP2AO43633 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP2AO43633 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP2AO43633 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.86■□□□□ 0.93
CHMP2AO43633 KRT8P7-201ENST00000533003 1432 ntBASIC20.86■□□□□ 0.93
CHMP2AO43633 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHMP2AO43633 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHMP2AO43633 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHMP2AO43633 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP2AO43633 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.85■□□□□ 0.93
CHMP2AO43633 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 AC138932.1-201ENST00000534164 6830 ntBASIC20.85■□□□□ 0.93
CHMP2AO43633 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHMP2AO43633 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP2AO43633 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP2AO43633 MIR3917-201ENST00000580971 93 ntBASIC20.85■□□□□ 0.93
CHMP2AO43633 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMP2AO43633 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.85■□□□□ 0.93
CHMP2AO43633 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
CHMP2AO43633 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 KRT8P50-201ENST00000562022 1438 ntBASIC20.85■□□□□ 0.93
CHMP2AO43633 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP2AO43633 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP2AO43633 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2AO43633 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 ANO7L1-203ENST00000602586 1720 ntBASIC20.84■□□□□ 0.93
CHMP2AO43633 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.84■□□□□ 0.93
CHMP2AO43633 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMP2AO43633 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CHMP2AO43633 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.84■□□□□ 0.93
CHMP2AO43633 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
CHMP2AO43633 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHMP2AO43633 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2AO43633 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2AO43633 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2AO43633 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2AO43633 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2AO43633 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2AO43633 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP2AO43633 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP2AO43633 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.83■□□□□ 0.93
CHMP2AO43633 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2AO43633 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2AO43633 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CHMP2AO43633 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP2AO43633 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP2AO43633 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.83■□□□□ 0.93
CHMP2AO43633 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP2AO43633 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.83■□□□□ 0.93
CHMP2AO43633 AC083849.1-201ENST00000615227 514 ntBASIC20.83■□□□□ 0.93
CHMP2AO43633 HYMAI.1-201ENST00000620949 238 ntBASIC20.83■□□□□ 0.93
CHMP2AO43633 LINC01311-201ENST00000565162 1445 ntBASIC20.83■□□□□ 0.93
CHMP2AO43633 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2AO43633 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2AO43633 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CHMP2AO43633 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2AO43633 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2AO43633 AC005082.1-201ENST00000413042 2259 ntBASIC20.83■□□□□ 0.92
CHMP2AO43633 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms