Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 AL031598.1-201ENST00000561511 1773 ntBASIC19.26■□□□□ 0.67
MSI1O43347 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MSI1O43347 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
MSI1O43347 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MSI1O43347 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MSI1O43347 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
MSI1O43347 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MSI1O43347 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.25■□□□□ 0.67
MSI1O43347 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MSI1O43347 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
MSI1O43347 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.25■□□□□ 0.67
MSI1O43347 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.25■□□□□ 0.67
MSI1O43347 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MSI1O43347 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.25■□□□□ 0.67
MSI1O43347 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.25■□□□□ 0.67
MSI1O43347 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.25■□□□□ 0.67
MSI1O43347 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.25■□□□□ 0.67
MSI1O43347 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
MSI1O43347 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
MSI1O43347 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.25■□□□□ 0.67
MSI1O43347 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 TNXA-203ENST00000507684 2038 ntBASIC19.25■□□□□ 0.67
MSI1O43347 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.25■□□□□ 0.67
MSI1O43347 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 LINC01311-201ENST00000565162 1445 ntBASIC19.25■□□□□ 0.67
MSI1O43347 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MSI1O43347 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MSI1O43347 AC093503.3-201ENST00000624917 2352 ntBASIC19.24■□□□□ 0.67
MSI1O43347 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.24■□□□□ 0.67
MSI1O43347 KRT18P41-201ENST00000518924 1277 ntBASIC19.24■□□□□ 0.67
MSI1O43347 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.24■□□□□ 0.67
MSI1O43347 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.24■□□□□ 0.67
MSI1O43347 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
MSI1O43347 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.24■□□□□ 0.67
MSI1O43347 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.24■□□□□ 0.67
MSI1O43347 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
MSI1O43347 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MSI1O43347 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MSI1O43347 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MSI1O43347 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 SPDYE13P-201ENST00000445314 798 ntBASIC19.23■□□□□ 0.67
MSI1O43347 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.23■□□□□ 0.67
MSI1O43347 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.23■□□□□ 0.67
MSI1O43347 BX323043.1-201ENST00000641006 1765 ntBASIC19.23■□□□□ 0.67
MSI1O43347 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.23■□□□□ 0.67
MSI1O43347 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MSI1O43347 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MSI1O43347 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.23■□□□□ 0.67
MSI1O43347 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MSI1O43347 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MSI1O43347 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
MSI1O43347 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
MSI1O43347 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MSI1O43347 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MSI1O43347 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.22■□□□□ 0.67
MSI1O43347 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.22■□□□□ 0.67
MSI1O43347 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 HBZP1-201ENST00000354915 429 ntBASIC19.22■□□□□ 0.67
MSI1O43347 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MSI1O43347 VENTXP5-201ENST00000523979 775 ntBASIC19.22■□□□□ 0.67
MSI1O43347 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.22■□□□□ 0.67
MSI1O43347 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.22■□□□□ 0.67
MSI1O43347 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms