Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3D1O14617 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.37■□□□□ 0.37
AP3D1O14617 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
AP3D1O14617 AC008040.2-201ENST00000461049 708 ntBASIC17.37■□□□□ 0.37
AP3D1O14617 AL031985.4-201ENST00000642138 673 ntBASIC17.37■□□□□ 0.37
AP3D1O14617 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
AP3D1O14617 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
AP3D1O14617 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
AP3D1O14617 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.37■□□□□ 0.37
AP3D1O14617 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.37■□□□□ 0.37
AP3D1O14617 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP3D1O14617 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3D1O14617 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3D1O14617 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3D1O14617 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3D1O14617 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
AP3D1O14617 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3D1O14617 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 AC004951.3-201ENST00000418645 1148 ntBASIC17.36■□□□□ 0.37
AP3D1O14617 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3D1O14617 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
AP3D1O14617 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.36■□□□□ 0.37
AP3D1O14617 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3D1O14617 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.36■□□□□ 0.37
AP3D1O14617 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.36■□□□□ 0.37
AP3D1O14617 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.36■□□□□ 0.37
AP3D1O14617 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP3D1O14617 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP3D1O14617 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP3D1O14617 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3D1O14617 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3D1O14617 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.35■□□□□ 0.37
AP3D1O14617 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3D1O14617 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3D1O14617 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3D1O14617 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 UBE2SP1-201ENST00000450587 669 ntBASIC17.35■□□□□ 0.37
AP3D1O14617 AC011506.1-201ENST00000474329 610 ntBASIC17.35■□□□□ 0.37
AP3D1O14617 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.35■□□□□ 0.37
AP3D1O14617 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3D1O14617 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP3D1O14617 AC011298.2-201ENST00000617989 482 ntBASIC17.35■□□□□ 0.37
AP3D1O14617 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
AP3D1O14617 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
AP3D1O14617 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3D1O14617 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
AP3D1O14617 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3D1O14617 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3D1O14617 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
AP3D1O14617 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3D1O14617 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3D1O14617 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 AC026271.3-201ENST00000571884 352 ntBASIC17.34■□□□□ 0.37
AP3D1O14617 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3D1O14617 CD177P1-201ENST00000606252 935 ntBASIC17.34■□□□□ 0.37
AP3D1O14617 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3D1O14617 AC135050.7-201ENST00000624508 2218 ntBASIC17.34■□□□□ 0.37
AP3D1O14617 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3D1O14617 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
AP3D1O14617 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3D1O14617 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
AP3D1O14617 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3D1O14617 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3D1O14617 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms