Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YJEFN3A6XGL0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
YJEFN3A6XGL0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
YJEFN3A6XGL0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
YJEFN3A6XGL0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.33■□□□□ 0.68
YJEFN3A6XGL0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 ARMC10P1-201ENST00000313754 855 ntBASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 AC087388.1-201ENST00000571370 1112 ntBASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.32■□□□□ 0.68
YJEFN3A6XGL0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 WIZP1-201ENST00000531444 2299 ntBASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 AC083849.1-201ENST00000615227 514 ntBASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
YJEFN3A6XGL0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 HBZP1-201ENST00000354915 429 ntBASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 LINC01311-201ENST00000565162 1445 ntBASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 AL138781.2-201ENST00000617896 1843 ntBASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.3■□□□□ 0.68
YJEFN3A6XGL0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 AL391807.1-203ENST00000604392 2365 ntBASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 SPDYE13P-201ENST00000445314 798 ntBASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YJEFN3A6XGL0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms