Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RCCD1A6NED2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RCCD1A6NED2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 AL096828.2-201ENST00000567259 1965 ntBASIC19.74■□□□□ 0.75
RCCD1A6NED2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.74■□□□□ 0.75
RCCD1A6NED2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 AC110285.5-201ENST00000611501 352 ntBASIC19.74■□□□□ 0.75
RCCD1A6NED2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.74■□□□□ 0.75
RCCD1A6NED2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RCCD1A6NED2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 RN7SL471P-201ENST00000580476 299 ntBASIC19.73■□□□□ 0.75
RCCD1A6NED2 AL353708.3-201ENST00000610272 989 ntBASIC19.73■□□□□ 0.75
RCCD1A6NED2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RCCD1A6NED2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.73■□□□□ 0.75
RCCD1A6NED2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 AL109659.2-201ENST00000606809 1674 ntBASIC19.72■□□□□ 0.75
RCCD1A6NED2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 AC011506.1-201ENST00000474329 610 ntBASIC19.72■□□□□ 0.75
RCCD1A6NED2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 AC011298.2-201ENST00000617989 482 ntBASIC19.72■□□□□ 0.75
RCCD1A6NED2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 AL645608.8-201ENST00000606034 2086 ntBASIC19.72■□□□□ 0.75
RCCD1A6NED2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RCCD1A6NED2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.72■□□□□ 0.75
RCCD1A6NED2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RCCD1A6NED2 KSR1P1-201ENST00000446298 240 ntBASIC19.71■□□□□ 0.75
RCCD1A6NED2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 AC130371.2-201ENST00000619443 611 ntBASIC19.71■□□□□ 0.75
RCCD1A6NED2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.71■□□□□ 0.75
RCCD1A6NED2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms