Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 GPAT2P1-201ENST00000444924 1672 ntBASIC18.82■□□□□ 0.6
CCDC78A2IDD5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CCDC78A2IDD5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 MIR4785-201ENST00000585005 73 ntBASIC18.81■□□□□ 0.6
CCDC78A2IDD5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC78A2IDD5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 MIR1238-201ENST00000408483 83 ntBASIC18.8■□□□□ 0.6
CCDC78A2IDD5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC78A2IDD5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 UNC93B2-201ENST00000285383 730 ntBASIC18.79■□□□□ 0.6
CCDC78A2IDD5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC78A2IDD5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms