Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SSC5DA1L4H1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.58■■□□□ 1.04
SSC5DA1L4H1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SSC5DA1L4H1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SSC5DA1L4H1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 FAM220CP-201ENST00000395253 831 ntBASIC21.57■■□□□ 1.04
SSC5DA1L4H1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SSC5DA1L4H1 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.57■■□□□ 1.04
SSC5DA1L4H1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.56■■□□□ 1.04
SSC5DA1L4H1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 AL138831.2-201ENST00000606564 490 ntBASIC21.56■■□□□ 1.04
SSC5DA1L4H1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SSC5DA1L4H1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 MIR940-201ENST00000401276 94 ntBASIC21.55■■□□□ 1.04
SSC5DA1L4H1 MTDHP3-201ENST00000594186 672 ntBASIC21.55■■□□□ 1.04
SSC5DA1L4H1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SSC5DA1L4H1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 SART3-203ENST00000546611 1184 ntBASIC21.54■■□□□ 1.04
SSC5DA1L4H1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 INTS4P1-201ENST00000438455 1935 ntBASIC21.54■■□□□ 1.04
SSC5DA1L4H1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSC5DA1L4H1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms