Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC189A1A4V9 KRT8P3-201ENST00000519669 1449 ntBASIC18.57■□□□□ 0.56
CCDC189A1A4V9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 AC004980.1-204ENST00000429707 299 ntBASIC18.57■□□□□ 0.56
CCDC189A1A4V9 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.57■□□□□ 0.56
CCDC189A1A4V9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 AC090164.3-201ENST00000610780 2143 ntBASIC18.57■□□□□ 0.56
CCDC189A1A4V9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.57■□□□□ 0.56
CCDC189A1A4V9 ANO7L1-203ENST00000602586 1720 ntBASIC18.57■□□□□ 0.56
CCDC189A1A4V9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC189A1A4V9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 HEIH-201ENST00000623091 1652 ntBASIC18.56■□□□□ 0.56
CCDC189A1A4V9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC189A1A4V9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 RCC2P6-201ENST00000526625 1557 ntBASIC18.55■□□□□ 0.56
CCDC189A1A4V9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 KRT8P11-201ENST00000409686 1436 ntBASIC18.55■□□□□ 0.56
CCDC189A1A4V9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC189A1A4V9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC189A1A4V9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms