Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 BX640515.1-201ENST00000617215 977 ntBASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC187A0A096LP49 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 FP475955.4-201ENST00000623131 1990 ntBASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC187A0A096LP49 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 POM121L3P-201ENST00000419331 1163 ntBASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 TSPY12P-201ENST00000421279 868 ntBASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 AP005901.3-202ENST00000581653 237 ntBASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 AC068587.9-201ENST00000641814 219 ntBASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC187A0A096LP49 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC187A0A096LP49 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms