Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 KRT17P2-201ENST00000300992 1314 ntBASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 SNORA78-201ENST00000459373 127 ntBASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 CROCCP3-202ENST00000420820 1947 ntBASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DRB4X5D2U9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 UNC93B2-201ENST00000285383 730 ntBASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 DET1-205ENST00000558413 583 ntTSL 4 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 AP005242.2-201ENST00000580065 1175 ntBASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HLA-DRB4X5D2U9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DRB4X5D2U9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms