Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 LINC01238-205ENST00000567549 1107 ntBASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.11■□□□□ 0.65
HS3ST4Q9Y661 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 AL163051.1-201ENST00000569214 1512 ntBASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 MIR3180-4-201ENST00000582223 153 ntBASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HS3ST4Q9Y661 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 AC005082.1-201ENST00000413042 2259 ntBASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 AC099343.3-201ENST00000605834 2503 ntBASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 AC126763.1-201ENST00000552015 2118 ntBASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 AC112907.2-201ENST00000448639 330 ntBASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 KRT18P35-201ENST00000510488 1269 ntBASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 AL445228.2-201ENST00000605589 952 ntBASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HS3ST4Q9Y661 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.08■□□□□ 0.65
HS3ST4Q9Y661 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.08■□□□□ 0.65
HS3ST4Q9Y661 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HS3ST4Q9Y661 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HS3ST4Q9Y661 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HS3ST4Q9Y661 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HS3ST4Q9Y661 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HS3ST4Q9Y661 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 HYMAI.1-201ENST00000620949 238 ntBASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 AC079602.3-201ENST00000623931 403 ntBASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HS3ST4Q9Y661 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 AC092597.1-201ENST00000487352 616 ntBASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 WIZP1-201ENST00000531444 2299 ntBASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 AL138781.2-201ENST00000617896 1843 ntBASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HS3ST4Q9Y661 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms