Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 AL109659.2-201ENST00000606809 1674 ntBASIC18.38■□□□□ 0.53
SNX11Q9Y5W9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 AL032819.2-201ENST00000624543 2162 ntBASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 TSPY19P-201ENST00000418461 509 ntBASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 PVRIG2P-201ENST00000435460 978 ntBASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 TSPY18P-201ENST00000441642 509 ntBASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 AC010240.3-201ENST00000607688 395 ntBASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 AL512353.2-201ENST00000448759 1962 ntBASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNX11Q9Y5W9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 AP000347.1-202ENST00000435868 847 ntBASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 TOB2P1-201ENST00000469761 992 ntBASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 AC104390.1-201ENST00000555663 520 ntBASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.36■□□□□ 0.53
SNX11Q9Y5W9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 Z83836.1-201ENST00000624605 1642 ntBASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 AC009078.2-202ENST00000463353 338 ntBASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 FOSL1P1-201ENST00000511041 816 ntBASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 AC091304.2-201ENST00000564639 760 ntBASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 AL121772.3-201ENST00000610840 674 ntBASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNX11Q9Y5W9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SNX11Q9Y5W9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms