Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 AL023973.1-201ENST00000624619 620 ntBASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 AL109659.2-201ENST00000606809 1674 ntBASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 TSPY17P-201ENST00000450329 467 ntBASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB1Q9Y5F3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 AL671277.2-201ENST00000458060 996 ntBASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 AL441883.1-201ENST00000566170 1045 ntBASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 AL353719.1-201ENST00000566847 864 ntBASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHB1Q9Y5F3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 WIZP1-201ENST00000531444 2299 ntBASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB1Q9Y5F3 HOMER2P1-201ENST00000455653 964 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms