Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CTDP1Q9Y5B0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 DUSP5P1-201ENST00000441325 1139 ntBASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 KRT8P26-201ENST00000534154 1276 ntBASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 MIR3652-201ENST00000579335 131 ntBASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.46■■□□□ 1.03
CTDP1Q9Y5B0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CTDP1Q9Y5B0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CTDP1Q9Y5B0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
CTDP1Q9Y5B0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 AC093525.10-201ENST00000625130 1569 ntBASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 MIR662-201ENST00000384847 95 ntBASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 AC009065.1-201ENST00000564055 1225 ntBASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 AC016734.2-201ENST00000624325 1377 ntBASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTDP1Q9Y5B0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AC007952.6-201ENST00000573168 2673 ntBASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AC003957.1-201ENST00000625108 2673 ntBASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 TSPY22P-201ENST00000427496 604 ntBASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 PRELID1P1-202ENST00000567272 903 ntBASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AL691432.3-201ENST00000621860 400 ntBASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 AC090340.1-201ENST00000620778 4980 ntBASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTDP1Q9Y5B0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms