Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 AC073210.2-201ENST00000430369 194 ntBASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPRKBQ9Y3C4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPRKBQ9Y3C4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 KRT17P1-201ENST00000399211 1546 ntBASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 MTMR9LP-203ENST00000426597 1545 ntBASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.96■□□□□ 0.3
TPRKBQ9Y3C4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 BID-214ENST00000617586 542 ntTSL 5 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 AC010980.2-201ENST00000587099 1412 ntBASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPRKBQ9Y3C4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TPRKBQ9Y3C4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms