Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 AC003957.1-201ENST00000625108 2673 ntBASIC22.54■■□□□ 1.2
LEMD3Q9Y2U8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.54■■□□□ 1.2
LEMD3Q9Y2U8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 AL160237.2-201ENST00000556165 472 ntBASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 AC138894.3-201ENST00000603787 634 ntBASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 AC083906.6-201ENST00000641366 219 ntBASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 AFG3L1P-217ENST00000557444 2447 ntBASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.53■■□□□ 1.2
LEMD3Q9Y2U8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 VENTXP7-201ENST00000475503 772 ntBASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.52■■□□□ 1.2
LEMD3Q9Y2U8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.52■■□□□ 1.19
LEMD3Q9Y2U8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 AC073130.3-201ENST00000624389 2278 ntBASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 AC079781.3-201ENST00000449110 356 ntBASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 AC009078.2-202ENST00000463353 338 ntBASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 AP005901.3-202ENST00000581653 237 ntBASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LEMD3Q9Y2U8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 MIR149-201ENST00000384879 89 ntBASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 AL353801.3-201ENST00000609898 542 ntBASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 AC004263.2-201ENST00000617183 678 ntBASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 AL161938.1-201ENST00000569833 2180 ntBASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 NSUN5P1-202ENST00000421140 1535 ntBASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 NSUN5P2-203ENST00000457352 1529 ntBASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LEMD3Q9Y2U8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms