Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 AL355802.2-201ENST00000402069 882 ntBASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 AC233263.1-201ENST00000578059 224 ntBASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 AL445675.2-201ENST00000620291 557 ntBASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPS28Q9Y2Q9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 AL357033.4-201ENST00000617703 1807 ntBASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 AC135776.1-201ENST00000319817 2481 ntBASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 AC026366.1-201ENST00000488803 879 ntBASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 RNA5SP413-201ENST00000516373 109 ntBASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 AC067852.2-201ENST00000590513 2313 ntBASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 KRT8P45-201ENST00000414328 1447 ntBASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPS28Q9Y2Q9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 AC008764.6-201ENST00000595909 2069 ntBASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16■□□□□ 0.15
MRPS28Q9Y2Q9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms