Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 MTMR9LP-203ENST00000426597 1545 ntBASIC20.68■□□□□ 0.9
GNEQ9Y223 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.68■□□□□ 0.9
GNEQ9Y223 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.67■□□□□ 0.9
GNEQ9Y223 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GNEQ9Y223 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
GNEQ9Y223 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.67■□□□□ 0.9
GNEQ9Y223 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.67■□□□□ 0.9
GNEQ9Y223 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.67■□□□□ 0.9
GNEQ9Y223 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.67■□□□□ 0.9
GNEQ9Y223 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.67■□□□□ 0.9
GNEQ9Y223 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
GNEQ9Y223 REXO1L6P-202ENST00000619970 1078 ntBASIC20.67■□□□□ 0.9
GNEQ9Y223 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GNEQ9Y223 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.67■□□□□ 0.9
GNEQ9Y223 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GNEQ9Y223 RNF165-205ENST00000588679 2904 ntBASIC20.67■□□□□ 0.9
GNEQ9Y223 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
GNEQ9Y223 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.66■□□□□ 0.9
GNEQ9Y223 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GNEQ9Y223 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.66■□□□□ 0.9
GNEQ9Y223 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.66■□□□□ 0.9
GNEQ9Y223 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.66■□□□□ 0.9
GNEQ9Y223 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.66■□□□□ 0.9
GNEQ9Y223 VENTXP7-201ENST00000475503 772 ntBASIC20.66■□□□□ 0.9
GNEQ9Y223 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.66■□□□□ 0.9
GNEQ9Y223 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.66■□□□□ 0.9
GNEQ9Y223 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.66■□□□□ 0.9
GNEQ9Y223 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.66■□□□□ 0.9
GNEQ9Y223 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.66■□□□□ 0.9
GNEQ9Y223 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.66■□□□□ 0.9
GNEQ9Y223 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.66■□□□□ 0.9
GNEQ9Y223 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
GNEQ9Y223 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GNEQ9Y223 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GNEQ9Y223 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GNEQ9Y223 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GNEQ9Y223 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GNEQ9Y223 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 HLA-A-201ENST00000376802 1334 ntBASIC20.65■□□□□ 0.9
GNEQ9Y223 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.65■□□□□ 0.9
GNEQ9Y223 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 SAPCD2P3-201ENST00000455031 850 ntBASIC20.65■□□□□ 0.9
GNEQ9Y223 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.65■□□□□ 0.9
GNEQ9Y223 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
GNEQ9Y223 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GNEQ9Y223 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GNEQ9Y223 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
GNEQ9Y223 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.65■□□□□ 0.9
GNEQ9Y223 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GNEQ9Y223 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GNEQ9Y223 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GNEQ9Y223 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.64■□□□□ 0.9
GNEQ9Y223 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
GNEQ9Y223 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.64■□□□□ 0.9
GNEQ9Y223 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.64■□□□□ 0.9
GNEQ9Y223 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GNEQ9Y223 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GNEQ9Y223 AL163051.1-201ENST00000569214 1512 ntBASIC20.64■□□□□ 0.9
GNEQ9Y223 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
GNEQ9Y223 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms