Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3H4Q9UPT8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 RNA5SP416-201ENST00000516838 111 ntBASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 RFPL4AP1-201ENST00000530883 850 ntBASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 TREX1-205ENST00000625293 1783 ntBASIC22.42■■□□□ 1.18
ZC3H4Q9UPT8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 AC034236.2-201ENST00000606662 1610 ntBASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3H4Q9UPT8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 RCN1P2-201ENST00000398357 915 ntBASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 AC021087.4-201ENST00000563761 564 ntBASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 SDHAP1-207ENST00000440850 2000 ntBASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 KRT18P28-201ENST00000453838 1332 ntBASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 LINC01006-201ENST00000333319 2292 ntBASIC22.4■■□□□ 1.18
ZC3H4Q9UPT8 AL512353.2-201ENST00000448759 1962 ntBASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 RNA5SP415-201ENST00000517246 115 ntBASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ZC3H4Q9UPT8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.39■■□□□ 1.17
ZC3H4Q9UPT8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms