Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL353719.1-201ENST00000566847 864 ntBASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 AL023803.3-201ENST00000615559 522 ntBASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 AC090164.3-201ENST00000610780 2143 ntBASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 AL512353.2-201ENST00000448759 1962 ntBASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 AC092647.4-201ENST00000457211 535 ntBASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCKIPSDQ9NZQ3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 AC117947.1-201ENST00000427448 529 ntBASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCKIPSDQ9NZQ3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 TSPY5P-201ENST00000426936 936 ntBASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NCKIPSDQ9NZQ3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NCKIPSDQ9NZQ3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms