Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 AL353801.3-201ENST00000609898 542 ntBASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HCFC1R1Q9NWW0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 NSUN5P1-202ENST00000421140 1535 ntBASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 NSUN5P2-203ENST00000457352 1529 ntBASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 AP002469.2-201ENST00000531724 424 ntBASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HCFC1R1Q9NWW0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HCFC1R1Q9NWW0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HCFC1R1Q9NWW0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HCFC1R1Q9NWW0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 AKR1C7P-201ENST00000305623 895 ntBASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 MRPL3P1-201ENST00000400109 1033 ntBASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 SLC25A6P4-201ENST00000586535 553 ntBASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HCFC1R1Q9NWW0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 NUS1P2-201ENST00000417358 873 ntBASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 AC079776.4-201ENST00000511039 504 ntBASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 AL121912.1-201ENST00000603683 238 ntBASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HCFC1R1Q9NWW0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms