Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC020916.1-201ENST00000587762 1774 ntBASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 AC069544.1-201ENST00000609399 999 ntBASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ESPNP-201ENST00000270691 2015 ntBASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 AC093677.2-201ENST00000600169 1863 ntBASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 SLC25A6P5-201ENST00000435663 894 ntBASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 AP003097.1-201ENST00000530657 1135 ntBASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC42SE2Q9NRR3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 KRASP1-201ENST00000407852 552 ntBASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AC104771.1-201ENST00000603335 964 ntBASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AL023875.1-201ENST00000640777 796 ntBASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AC138028.4-201ENST00000564984 1845 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms