Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRRC40Q9H9A6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 KRT17P2-201ENST00000300992 1314 ntBASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 SNORA78-201ENST00000459373 127 ntBASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.87■□□□□ 0.61
LRRC40Q9H9A6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 FITM1-202ENST00000559294 800 ntBASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 MIR3180-5-201ENST00000583743 153 ntBASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 AP000525.1-201ENST00000608286 694 ntBASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 BCL2-203ENST00000589955 5011 ntBASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
LRRC40Q9H9A6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 MYLKP1-201ENST00000509077 1580 ntBASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 AL162741.1-201ENST00000565563 1558 ntBASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 AP000593.1-201ENST00000393668 712 ntBASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 TSPY17P-201ENST00000450329 467 ntBASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 AL023803.3-201ENST00000615559 522 ntBASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 AC034236.2-201ENST00000606662 1610 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms