Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 AC079781.3-201ENST00000449110 356 ntBASIC19.17■□□□□ 0.66
BRD9Q9H8M2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 AC074051.2-201ENST00000565115 352 ntBASIC19.17■□□□□ 0.66
BRD9Q9H8M2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 AC138894.3-201ENST00000603787 634 ntBASIC19.17■□□□□ 0.66
BRD9Q9H8M2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.17■□□□□ 0.66
BRD9Q9H8M2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.16■□□□□ 0.66
BRD9Q9H8M2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 AC104692.2-201ENST00000603054 253 ntBASIC19.16■□□□□ 0.66
BRD9Q9H8M2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.16■□□□□ 0.66
BRD9Q9H8M2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BRD9Q9H8M2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 TEX21P-204ENST00000641479 1693 ntBASIC19.15■□□□□ 0.66
BRD9Q9H8M2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 MIR564-202ENST00000385049 94 ntBASIC19.15■□□□□ 0.66
BRD9Q9H8M2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 AL390719.2-201ENST00000606993 987 ntBASIC19.15■□□□□ 0.66
BRD9Q9H8M2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 AL032819.2-201ENST00000624543 2162 ntBASIC19.15■□□□□ 0.66
BRD9Q9H8M2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRD9Q9H8M2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRD9Q9H8M2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.14■□□□□ 0.66
BRD9Q9H8M2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRD9Q9H8M2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 Z69720.1-201ENST00000601483 472 ntBASIC19.14■□□□□ 0.65
BRD9Q9H8M2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 LINC00167-201ENST00000530583 1419 ntBASIC19.14■□□□□ 0.65
BRD9Q9H8M2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD9Q9H8M2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms