Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 AP000593.1-201ENST00000393668 712 ntBASIC21.62■■□□□ 1.05
SH2D4AQ9H788 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 AP003733.1-201ENST00000491725 852 ntBASIC21.62■■□□□ 1.05
SH2D4AQ9H788 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 PRELID1P1-202ENST00000567272 903 ntBASIC21.62■■□□□ 1.05
SH2D4AQ9H788 MIR3180-1-201ENST00000580374 94 ntBASIC21.62■■□□□ 1.05
SH2D4AQ9H788 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 MIR3180-3-201ENST00000584616 94 ntBASIC21.62■■□□□ 1.05
SH2D4AQ9H788 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 AP002414.4-201ENST00000589764 1148 ntBASIC21.62■■□□□ 1.05
SH2D4AQ9H788 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH2D4AQ9H788 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 AP002383.4-201ENST00000442518 975 ntBASIC21.61■■□□□ 1.05
SH2D4AQ9H788 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 RNF126P1-202ENST00000569893 925 ntBASIC21.61■■□□□ 1.05
SH2D4AQ9H788 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 AL357033.4-201ENST00000617703 1807 ntBASIC21.61■■□□□ 1.05
SH2D4AQ9H788 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SH2D4AQ9H788 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 KRT18P1-202ENST00000452408 1331 ntBASIC21.6■■□□□ 1.05
SH2D4AQ9H788 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 Z83836.1-201ENST00000624605 1642 ntBASIC21.6■■□□□ 1.05
SH2D4AQ9H788 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 KRT18P41-201ENST00000518924 1277 ntBASIC21.6■■□□□ 1.05
SH2D4AQ9H788 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH2D4AQ9H788 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 TPM4P1-201ENST00000436100 807 ntBASIC21.59■■□□□ 1.05
SH2D4AQ9H788 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH2D4AQ9H788 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms