Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 AL671277.2-201ENST00000458060 996 ntBASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 AC008556.1-201ENST00000610908 2040 ntBASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDCP1Q9H5V8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 AL109659.2-201ENST00000606809 1674 ntBASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 STARP1-201ENST00000397973 869 ntBASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 AC112907.2-201ENST00000448639 330 ntBASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 AL358472.4-201ENST00000633140 710 ntBASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDCP1Q9H5V8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.29■□□□□ 0.36
CDCP1Q9H5V8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms