Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 Z83836.1-201ENST00000624605 1642 ntBASIC20.04■□□□□ 0.8
NXF3Q9H4D5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.04■□□□□ 0.8
NXF3Q9H4D5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 MIR3180-1-201ENST00000580374 94 ntBASIC20.03■□□□□ 0.8
NXF3Q9H4D5 MIR3180-3-201ENST00000584616 94 ntBASIC20.03■□□□□ 0.8
NXF3Q9H4D5 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 AC012313.10-201ENST00000623509 926 ntBASIC20.03■□□□□ 0.8
NXF3Q9H4D5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.03■□□□□ 0.8
NXF3Q9H4D5 AL499627.1-201ENST00000569373 2188 ntBASIC20.02■□□□□ 0.8
NXF3Q9H4D5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 AL163051.1-201ENST00000569214 1512 ntBASIC20.02■□□□□ 0.8
NXF3Q9H4D5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 AP003733.1-201ENST00000491725 852 ntBASIC20.02■□□□□ 0.8
NXF3Q9H4D5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NXF3Q9H4D5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.02■□□□□ 0.79
NXF3Q9H4D5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NXF3Q9H4D5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.02■□□□□ 0.79
NXF3Q9H4D5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.02■□□□□ 0.79
NXF3Q9H4D5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 AP000593.1-201ENST00000393668 712 ntBASIC20.01■□□□□ 0.79
NXF3Q9H4D5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 AC009065.1-201ENST00000564055 1225 ntBASIC20.01■□□□□ 0.79
NXF3Q9H4D5 AP002414.4-201ENST00000589764 1148 ntBASIC20.01■□□□□ 0.79
NXF3Q9H4D5 AC005332.3-201ENST00000589904 676 ntBASIC20.01■□□□□ 0.79
NXF3Q9H4D5 AC092329.2-201ENST00000598402 547 ntBASIC20.01■□□□□ 0.79
NXF3Q9H4D5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NXF3Q9H4D5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
NXF3Q9H4D5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms