Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 AL035563.1-201ENST00000609087 1539 ntBASIC20.63■□□□□ 0.89
RNF39Q9H2S5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF39Q9H2S5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.62■□□□□ 0.89
RNF39Q9H2S5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 MTND4P11-201ENST00000417020 1058 ntBASIC20.62■□□□□ 0.89
RNF39Q9H2S5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 AC010486.3-201ENST00000511602 785 ntBASIC20.62■□□□□ 0.89
RNF39Q9H2S5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF39Q9H2S5 AL122008.3-201ENST00000412483 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 AC006455.6-201ENST00000426192 893 ntBASIC20.61■□□□□ 0.89
RNF39Q9H2S5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 AC068587.2-201ENST00000478386 781 ntBASIC20.61■□□□□ 0.89
RNF39Q9H2S5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 AC106730.3-201ENST00000624568 641 ntBASIC20.61■□□□□ 0.89
RNF39Q9H2S5 MYC-208ENST00000641036 567 ntBASIC20.61■□□□□ 0.89
RNF39Q9H2S5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF39Q9H2S5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 LINC00879-205ENST00000470465 757 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 OR4A19P-201ENST00000533579 1103 ntBASIC20.6■□□□□ 0.89
RNF39Q9H2S5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 LINC00564-201ENST00000567258 1119 ntBASIC20.6■□□□□ 0.89
RNF39Q9H2S5 AL512604.3-201ENST00000569583 964 ntBASIC20.6■□□□□ 0.89
RNF39Q9H2S5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 AP001010.1-201ENST00000588397 538 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF39Q9H2S5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms