Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 KRASP1-201ENST00000407852 552 ntBASIC18.71■□□□□ 0.59
VPS11Q9H270 SLC25A6P5-201ENST00000435663 894 ntBASIC18.71■□□□□ 0.59
VPS11Q9H270 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS11Q9H270 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS11Q9H270 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
VPS11Q9H270 Z85996.1-201ENST00000494644 937 ntBASIC18.71■□□□□ 0.59
VPS11Q9H270 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS11Q9H270 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS11Q9H270 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.71■□□□□ 0.59
VPS11Q9H270 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.71■□□□□ 0.59
VPS11Q9H270 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.71■□□□□ 0.59
VPS11Q9H270 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS11Q9H270 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS11Q9H270 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS11Q9H270 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VPS11Q9H270 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.71■□□□□ 0.59
VPS11Q9H270 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VPS11Q9H270 AL499627.1-201ENST00000569373 2188 ntBASIC18.71■□□□□ 0.59
VPS11Q9H270 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
VPS11Q9H270 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS11Q9H270 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
VPS11Q9H270 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
VPS11Q9H270 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS11Q9H270 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS11Q9H270 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
VPS11Q9H270 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VPS11Q9H270 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
VPS11Q9H270 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VPS11Q9H270 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.7■□□□□ 0.58
VPS11Q9H270 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VPS11Q9H270 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VPS11Q9H270 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS11Q9H270 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS11Q9H270 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VPS11Q9H270 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 AC239809.2-201ENST00000415381 517 ntBASIC18.69■□□□□ 0.58
VPS11Q9H270 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS11Q9H270 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 AC026366.1-201ENST00000488803 879 ntBASIC18.69■□□□□ 0.58
VPS11Q9H270 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.69■□□□□ 0.58
VPS11Q9H270 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS11Q9H270 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.69■□□□□ 0.58
VPS11Q9H270 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.69■□□□□ 0.58
VPS11Q9H270 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.69■□□□□ 0.58
VPS11Q9H270 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.69■□□□□ 0.58
VPS11Q9H270 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 GNAS-203ENST00000306120 1878 ntBASIC18.69■□□□□ 0.58
VPS11Q9H270 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 MTMR9LP-203ENST00000426597 1545 ntBASIC18.69■□□□□ 0.58
VPS11Q9H270 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.69■□□□□ 0.58
VPS11Q9H270 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VPS11Q9H270 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS11Q9H270 LINC00896-202ENST00000609602 2128 ntBASIC18.68■□□□□ 0.58
VPS11Q9H270 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
VPS11Q9H270 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS11Q9H270 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms