Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDT1Q9H211 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CDT1Q9H211 MYLKP1-201ENST00000509077 1580 ntBASIC20.09■□□□□ 0.81
CDT1Q9H211 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.09■□□□□ 0.81
CDT1Q9H211 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.09■□□□□ 0.81
CDT1Q9H211 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 AC009065.1-201ENST00000564055 1225 ntBASIC20.09■□□□□ 0.81
CDT1Q9H211 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.09■□□□□ 0.81
CDT1Q9H211 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.09■□□□□ 0.81
CDT1Q9H211 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.09■□□□□ 0.81
CDT1Q9H211 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.09■□□□□ 0.81
CDT1Q9H211 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.09■□□□□ 0.81
CDT1Q9H211 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CDT1Q9H211 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDT1Q9H211 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.08■□□□□ 0.81
CDT1Q9H211 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.08■□□□□ 0.81
CDT1Q9H211 AC099343.3-201ENST00000605834 2503 ntBASIC20.08■□□□□ 0.81
CDT1Q9H211 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CDT1Q9H211 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDT1Q9H211 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDT1Q9H211 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDT1Q9H211 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDT1Q9H211 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.08■□□□□ 0.81
CDT1Q9H211 MIR662-201ENST00000384847 95 ntBASIC20.08■□□□□ 0.81
CDT1Q9H211 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.08■□□□□ 0.81
CDT1Q9H211 UPK3BP1-201ENST00000428678 509 ntBASIC20.08■□□□□ 0.81
CDT1Q9H211 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.08■□□□□ 0.81
CDT1Q9H211 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.08■□□□□ 0.81
CDT1Q9H211 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CDT1Q9H211 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.08■□□□□ 0.81
CDT1Q9H211 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.08■□□□□ 0.81
CDT1Q9H211 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.08■□□□□ 0.81
CDT1Q9H211 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.08■□□□□ 0.81
CDT1Q9H211 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDT1Q9H211 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDT1Q9H211 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDT1Q9H211 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
CDT1Q9H211 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDT1Q9H211 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDT1Q9H211 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.08■□□□□ 0.8
CDT1Q9H211 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDT1Q9H211 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDT1Q9H211 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.07■□□□□ 0.8
CDT1Q9H211 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.07■□□□□ 0.8
CDT1Q9H211 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.07■□□□□ 0.8
CDT1Q9H211 AL162741.1-201ENST00000565563 1558 ntBASIC20.07■□□□□ 0.8
CDT1Q9H211 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDT1Q9H211 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CDT1Q9H211 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDT1Q9H211 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 AC018445.3-201ENST00000624177 1945 ntBASIC20.06■□□□□ 0.8
CDT1Q9H211 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.06■□□□□ 0.8
CDT1Q9H211 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.06■□□□□ 0.8
CDT1Q9H211 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.06■□□□□ 0.8
CDT1Q9H211 MIR149-201ENST00000384879 89 ntBASIC20.06■□□□□ 0.8
CDT1Q9H211 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.06■□□□□ 0.8
CDT1Q9H211 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.06■□□□□ 0.8
CDT1Q9H211 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.06■□□□□ 0.8
CDT1Q9H211 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.06■□□□□ 0.8
CDT1Q9H211 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDT1Q9H211 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.06■□□□□ 0.8
CDT1Q9H211 AIRN-201ENST00000601203 4374 ntBASIC20.06■□□□□ 0.8
CDT1Q9H211 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDT1Q9H211 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 AC098818.2-201ENST00000564925 2320 ntBASIC20.05■□□□□ 0.8
CDT1Q9H211 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.05■□□□□ 0.8
CDT1Q9H211 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.05■□□□□ 0.8
CDT1Q9H211 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDT1Q9H211 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.05■□□□□ 0.8
CDT1Q9H211 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms