Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 REXO1L12P-201ENST00000622156 912 ntBASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBA1CQ9BQE3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 AIRN-201ENST00000601203 4374 ntBASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 NUDT16P1-203ENST00000513809 620 ntBASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 LINC00896-202ENST00000609602 2128 ntBASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 KRT16P1-201ENST00000399124 1418 ntBASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TUBA1CQ9BQE3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA1CQ9BQE3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA1CQ9BQE3 AC073592.3-201ENST00000625118 1834 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms