Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC38A3Q99624 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC38A3Q99624 BCL2-203ENST00000589955 5011 ntBASIC17.99■□□□□ 0.47
SLC38A3Q99624 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC38A3Q99624 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC38A3Q99624 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC38A3Q99624 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 BX276092.5-203ENST00000456199 560 ntBASIC17.98■□□□□ 0.47
SLC38A3Q99624 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 HEIH-201ENST00000623091 1652 ntBASIC17.98■□□□□ 0.47
SLC38A3Q99624 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC38A3Q99624 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC38A3Q99624 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC38A3Q99624 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 AL162741.1-201ENST00000565563 1558 ntBASIC17.97■□□□□ 0.47
SLC38A3Q99624 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 MIR3180-4-201ENST00000582223 153 ntBASIC17.97■□□□□ 0.47
SLC38A3Q99624 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC38A3Q99624 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC38A3Q99624 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC38A3Q99624 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC38A3Q99624 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
SLC38A3Q99624 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC38A3Q99624 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC38A3Q99624 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SLC38A3Q99624 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 KRT18P48-201ENST00000434763 852 ntBASIC17.96■□□□□ 0.47
SLC38A3Q99624 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC38A3Q99624 AL121672.3-201ENST00000608644 468 ntBASIC17.96■□□□□ 0.47
SLC38A3Q99624 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC38A3Q99624 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.96■□□□□ 0.47
SLC38A3Q99624 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC38A3Q99624 Z98044.1-201ENST00000632503 1764 ntBASIC17.96■□□□□ 0.47
SLC38A3Q99624 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC38A3Q99624 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC38A3Q99624 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
SLC38A3Q99624 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SLC38A3Q99624 AL161938.1-201ENST00000569833 2180 ntBASIC17.96■□□□□ 0.46
SLC38A3Q99624 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC38A3Q99624 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SLC38A3Q99624 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
SLC38A3Q99624 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms