Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDNQ99608 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NDNQ99608 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.63■□□□□ 0.57
NDNQ99608 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.63■□□□□ 0.57
NDNQ99608 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
NDNQ99608 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NDNQ99608 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDNQ99608 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDNQ99608 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDNQ99608 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.63■□□□□ 0.57
NDNQ99608 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.63■□□□□ 0.57
NDNQ99608 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.63■□□□□ 0.57
NDNQ99608 RCC2P3-201ENST00000418112 1537 ntBASIC18.63■□□□□ 0.57
NDNQ99608 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
NDNQ99608 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.63■□□□□ 0.57
NDNQ99608 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NDNQ99608 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDNQ99608 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDNQ99608 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NDNQ99608 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NDNQ99608 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 AL390961.4-201ENST00000623958 2535 ntBASIC18.62■□□□□ 0.57
NDNQ99608 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.62■□□□□ 0.57
NDNQ99608 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NDNQ99608 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.62■□□□□ 0.57
NDNQ99608 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.62■□□□□ 0.57
NDNQ99608 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.62■□□□□ 0.57
NDNQ99608 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.62■□□□□ 0.57
NDNQ99608 AP000692.2-201ENST00000608391 879 ntBASIC18.62■□□□□ 0.57
NDNQ99608 AC113410.3-201ENST00000623366 203 ntBASIC18.62■□□□□ 0.57
NDNQ99608 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
NDNQ99608 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
NDNQ99608 AL357033.4-201ENST00000617703 1807 ntBASIC18.62■□□□□ 0.57
NDNQ99608 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.62■□□□□ 0.57
NDNQ99608 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.62■□□□□ 0.57
NDNQ99608 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 AC099398.1-201ENST00000567919 2776 ntBASIC18.62■□□□□ 0.57
NDNQ99608 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.62■□□□□ 0.57
NDNQ99608 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDNQ99608 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
NDNQ99608 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NDNQ99608 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.61■□□□□ 0.57
NDNQ99608 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.61■□□□□ 0.57
NDNQ99608 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.61■□□□□ 0.57
NDNQ99608 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.61■□□□□ 0.57
NDNQ99608 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.61■□□□□ 0.57
NDNQ99608 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.61■□□□□ 0.57
NDNQ99608 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.61■□□□□ 0.57
NDNQ99608 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.61■□□□□ 0.57
NDNQ99608 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NDNQ99608 NUDT16P1-203ENST00000513809 620 ntBASIC18.61■□□□□ 0.57
NDNQ99608 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.61■□□□□ 0.57
NDNQ99608 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NDNQ99608 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.61■□□□□ 0.57
NDNQ99608 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDNQ99608 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.61■□□□□ 0.57
NDNQ99608 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
NDNQ99608 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
NDNQ99608 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.6■□□□□ 0.57
NDNQ99608 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.6■□□□□ 0.57
NDNQ99608 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NDNQ99608 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.6■□□□□ 0.57
NDNQ99608 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.6■□□□□ 0.57
NDNQ99608 SLC25A1P4-201ENST00000567977 778 ntBASIC18.6■□□□□ 0.57
NDNQ99608 AC233702.5-201ENST00000584107 538 ntBASIC18.6■□□□□ 0.57
NDNQ99608 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms