Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB40CQ96S21 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB40CQ96S21 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB40CQ96S21 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.08■□□□□ 0.01
RAB40CQ96S21 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RAB40CQ96S21 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.08■□□□□ 0.01
RAB40CQ96S21 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.08■□□□□ 0
RAB40CQ96S21 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.08■□□□□ 0
RAB40CQ96S21 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RAB40CQ96S21 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RAB40CQ96S21 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.08■□□□□ 0
RAB40CQ96S21 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RAB40CQ96S21 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.08■□□□□ 0
RAB40CQ96S21 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.08■□□□□ 0
RAB40CQ96S21 AL160286.2-201ENST00000567150 934 ntBASIC15.08■□□□□ 0
RAB40CQ96S21 AC068587.9-201ENST00000641814 219 ntBASIC15.08■□□□□ 0
RAB40CQ96S21 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.08■□□□□ 0
RAB40CQ96S21 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RAB40CQ96S21 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.08■□□□□ 0
RAB40CQ96S21 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40CQ96S21 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
RAB40CQ96S21 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.07■□□□□ 0
RAB40CQ96S21 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.07■□□□□ 0
RAB40CQ96S21 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40CQ96S21 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40CQ96S21 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.07■□□□□ 0
RAB40CQ96S21 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.07■□□□□ 0
RAB40CQ96S21 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 BX276092.2-201ENST00000417668 665 ntBASIC15.07■□□□□ 0
RAB40CQ96S21 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.07■□□□□ 0
RAB40CQ96S21 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.07■□□□□ 0
RAB40CQ96S21 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.07■□□□□ 0
RAB40CQ96S21 AC083906.2-201ENST00000511578 360 ntBASIC15.07■□□□□ 0
RAB40CQ96S21 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.07■□□□□ 0
RAB40CQ96S21 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.07■□□□□ 0
RAB40CQ96S21 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.07■□□□□ 0
RAB40CQ96S21 AL121832.2-201ENST00000610979 668 ntBASIC15.07■□□□□ 0
RAB40CQ96S21 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40CQ96S21 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40CQ96S21 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
RAB40CQ96S21 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.07■□□□□ 0
RAB40CQ96S21 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
RAB40CQ96S21 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.07■□□□□ 0
RAB40CQ96S21 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40CQ96S21 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40CQ96S21 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40CQ96S21 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.06■□□□□ 0
RAB40CQ96S21 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.06■□□□□ 0
RAB40CQ96S21 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.06■□□□□ 0
RAB40CQ96S21 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
RAB40CQ96S21 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
RAB40CQ96S21 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RAB40CQ96S21 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RAB40CQ96S21 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RAB40CQ96S21 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.06■□□□□ 0
RAB40CQ96S21 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.06■□□□□ 0
RAB40CQ96S21 AL121829.2-201ENST00000620908 328 ntBASIC15.06■□□□□ 0
RAB40CQ96S21 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.06■□□□□ 0
RAB40CQ96S21 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.06■□□□□ 0
RAB40CQ96S21 KRT8P45-201ENST00000414328 1447 ntBASIC15.06■□□□□ 0
RAB40CQ96S21 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40CQ96S21 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RAB40CQ96S21 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB40CQ96S21 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms