Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 PCED1CP-201ENST00000419887 785 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 KRT8P3-201ENST00000519669 1449 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 NEK4P2-201ENST00000580004 1012 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 MIR3180-5-201ENST00000583743 153 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 AC091076.1-201ENST00000610741 619 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 AC008556.1-201ENST00000610908 2040 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 AC093458.2-201ENST00000623150 629 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.45□□□□□ -0.1
DUX3Q96PT4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DUX3Q96PT4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.45□□□□□ -0.1
DUX3Q96PT4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 AC141586.3-201ENST00000562166 1838 ntBASIC14.44□□□□□ -0.1
DUX3Q96PT4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 FAM86EP-206ENST00000510506 987 ntBASIC14.44□□□□□ -0.1
DUX3Q96PT4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.44□□□□□ -0.1
DUX3Q96PT4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DUX3Q96PT4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.44□□□□□ -0.1
DUX3Q96PT4 FEM1AP3-201ENST00000403722 1741 ntBASIC14.44□□□□□ -0.1
DUX3Q96PT4 AL512353.2-201ENST00000448759 1962 ntBASIC14.43□□□□□ -0.1
DUX3Q96PT4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 LINC01311-201ENST00000565162 1445 ntBASIC14.43□□□□□ -0.1
DUX3Q96PT4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms