Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 AC148477.8-201ENST00000624298 468 ntBASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN4Q96NY8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 RPS2P28-201ENST00000314255 741 ntBASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 RPL13AP23-201ENST00000480739 586 ntBASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.19■□□□□ 0.66
NECTIN4Q96NY8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 FEM1AP3-201ENST00000403722 1741 ntBASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 AC132008.2-207ENST00000454517 770 ntBASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 SCARNA2-201ENST00000458748 420 ntBASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.18■□□□□ 0.66
NECTIN4Q96NY8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN4Q96NY8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms