Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC74BQ96LY2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 AC091304.2-201ENST00000564639 760 ntBASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 AC074051.2-201ENST00000565115 352 ntBASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC74BQ96LY2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 LINC00167-201ENST00000530583 1419 ntBASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 AC138894.3-201ENST00000603787 634 ntBASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 AL592071.1-201ENST00000611956 408 ntBASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 MTMR9LP-203ENST00000426597 1545 ntBASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 AC233702.3-201ENST00000578656 1387 ntBASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC74BQ96LY2 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.64■□□□□ 0.42
CCDC74BQ96LY2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC74BQ96LY2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 EMBP1-201ENST00000458200 901 ntBASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC74BQ96LY2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 KRT18P31-201ENST00000506277 1292 ntBASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 GUSBP12-201ENST00000513727 720 ntBASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 LINC01711-201ENST00000598340 967 ntBASIC17.63■□□□□ 0.41
CCDC74BQ96LY2 Z69720.1-201ENST00000601483 472 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms