Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
LRRC39Q96DD0 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 AC096733.2-201ENST00000609937 1394 ntBASIC18.77■□□□□ 0.6
LRRC39Q96DD0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC39Q96DD0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
LRRC39Q96DD0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.77■□□□□ 0.59
LRRC39Q96DD0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.77■□□□□ 0.59
LRRC39Q96DD0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC39Q96DD0 AC138028.4-201ENST00000564984 1845 ntBASIC18.77■□□□□ 0.59
LRRC39Q96DD0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 MESTP1-201ENST00000404287 994 ntBASIC18.76■□□□□ 0.59
LRRC39Q96DD0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRRC39Q96DD0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 AL135905.2-201ENST00000584934 1404 ntBASIC18.75■□□□□ 0.59
LRRC39Q96DD0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 ESPNP-201ENST00000270691 2015 ntBASIC18.75■□□□□ 0.59
LRRC39Q96DD0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 DGCR10-201ENST00000609839 495 ntBASIC18.75■□□□□ 0.59
LRRC39Q96DD0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRC39Q96DD0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
LRRC39Q96DD0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms