Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA4DQ92854 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA4DQ92854 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA4DQ92854 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 ECEL1P3-201ENST00000427961 737 ntBASIC19.97■□□□□ 0.79
SEMA4DQ92854 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA4DQ92854 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA4DQ92854 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA4DQ92854 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SEMA4DQ92854 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
SEMA4DQ92854 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SEMA4DQ92854 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.96■□□□□ 0.79
SEMA4DQ92854 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 AP000593.1-201ENST00000393668 712 ntBASIC19.95■□□□□ 0.78
SEMA4DQ92854 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 AC112497.1-201ENST00000624824 639 ntBASIC19.95■□□□□ 0.78
SEMA4DQ92854 AC141257.4-201ENST00000634557 245 ntBASIC19.95■□□□□ 0.78
SEMA4DQ92854 AC136944.6-201ENST00000634818 245 ntBASIC19.95■□□□□ 0.78
SEMA4DQ92854 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.95■□□□□ 0.78
SEMA4DQ92854 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.95■□□□□ 0.78
SEMA4DQ92854 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SEMA4DQ92854 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms