Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 KRT8P3-201ENST00000519669 1449 ntBASIC14.68□□□□□ -0.06
NPIPB3Q92617 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
NPIPB3Q92617 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPB3Q92617 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 AC124016.1-201ENST00000609552 612 ntBASIC14.67□□□□□ -0.06
NPIPB3Q92617 AC110285.5-201ENST00000611501 352 ntBASIC14.67□□□□□ -0.06
NPIPB3Q92617 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
NPIPB3Q92617 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPB3Q92617 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 AC112777.1-201ENST00000540175 1423 ntBASIC14.66□□□□□ -0.06
NPIPB3Q92617 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 AL357033.4-201ENST00000617703 1807 ntBASIC14.66□□□□□ -0.06
NPIPB3Q92617 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPB3Q92617 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB3Q92617 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms