Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TM9SF4Q92544 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TM9SF4Q92544 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.52■□□□□ 0.4
TM9SF4Q92544 KRT18P48-201ENST00000434763 852 ntBASIC17.52■□□□□ 0.4
TM9SF4Q92544 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.52■□□□□ 0.4
TM9SF4Q92544 AC069148.1-201ENST00000608741 768 ntBASIC17.52■□□□□ 0.4
TM9SF4Q92544 AC093458.2-201ENST00000623150 629 ntBASIC17.52■□□□□ 0.4
TM9SF4Q92544 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TM9SF4Q92544 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TM9SF4Q92544 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.52■□□□□ 0.39
TM9SF4Q92544 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.52■□□□□ 0.39
TM9SF4Q92544 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TM9SF4Q92544 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
TM9SF4Q92544 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TM9SF4Q92544 HCG11-201ENST00000411553 5696 ntBASIC17.51■□□□□ 0.39
TM9SF4Q92544 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 STARP1-201ENST00000397973 869 ntBASIC17.51■□□□□ 0.39
TM9SF4Q92544 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 KRT126P-201ENST00000549467 1181 ntBASIC17.51■□□□□ 0.39
TM9SF4Q92544 AL136038.3-201ENST00000561909 1096 ntBASIC17.51■□□□□ 0.39
TM9SF4Q92544 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM9SF4Q92544 AC009113.1-201ENST00000570267 2443 ntBASIC17.51■□□□□ 0.39
TM9SF4Q92544 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TM9SF4Q92544 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF4Q92544 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 AC005332.1-201ENST00000577698 1310 ntBASIC17.5■□□□□ 0.39
TM9SF4Q92544 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF4Q92544 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF4Q92544 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM9SF4Q92544 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.5■□□□□ 0.39
TM9SF4Q92544 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms