Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 AC138028.4-201ENST00000564984 1845 ntBASIC12.57□□□□□ -0.4
COPS9Q8WXC6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
COPS9Q8WXC6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 OR2A1-AS1-204ENST00000470435 602 ntBASIC12.56□□□□□ -0.4
COPS9Q8WXC6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 AL591742.1-201ENST00000604433 565 ntBASIC12.56□□□□□ -0.4
COPS9Q8WXC6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS9Q8WXC6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 AL356309.3-201ENST00000624132 1934 ntBASIC12.55□□□□□ -0.4
COPS9Q8WXC6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 IRS3P-201ENST00000223076 1006 ntBASIC12.55□□□□□ -0.4
COPS9Q8WXC6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS9Q8WXC6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms